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Article

Genotype-Corrector: improved genotype calls for genetic mapping in F2 and RIL populations.

Scientific reports - 4 Jul 2018

Miao Chenyong, Fang Jingping, Li Delin, Liang Pingping, Zhang Xingtan, Yang Jinliang, Schnable James C, Tang Haibao

Abstract excerpt

F2 and recombinant inbred lines (RILs) populations are very commonly used in plant genetic mapping studies. Although genome-wide genetic markers like single nucleotide polymorphisms (SNPs) can be readily identified by a wide array of methods, accurate genotype calling remains challenging, especially for heterozygous loci and missing data due to low sequencing coverage per individual. Therefore, we developed...

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Identifiers

PMID: 29973633
DOI: 10.1038/s41598-018-28294-0
PMCID: PMC6031647

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