Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Genotype imputation from various low-density SNP panels and its impact on accuracy of genomic breeding values in pigs.

Animal : an international journal of animal bioscience - 1 Nov 2018

Grossi D A, Brito L F, Jafarikia M, Schenkel F S, Feng Z

Abstract excerpt

The uptake of genomic selection (GS) by the swine industry is still limited by the costs of genotyping. A feasible alternative to overcome this challenge is to genotype animals using an affordable low-density (LD) single nucleotide polymorphism (SNP) chip panel followed by accurate imputation to a high-density panel. Therefore, the main objective of this study was to screen incremental densities of LD panels in...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Breeding
Share to Genome
Share to Genomics

Methodology Data sources Editorial policy Privacy Delete account & data About Contact Helena Bioinformatics

Share to Genotype

Share to Oligonucleotide Array Sequence Analysis

Share to Phenotype

Share to Polymorphism, Single Nucleotide

Source

Identifiers

PMID: 29706144
DOI: 10.1017/S175173111800085X

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence. Graph snapshot: 2026-09-29.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Genotype imputation from various low-density SNP panels and its impact on accuracy of genomic breeding values in pigs.PMID 29706144Read ↗

Accuracy of estimation of genomic breeding values in pigs using low-density genotypes and imputation.Semantic proximity Read ↗

Practical implementation of cost-effective genomic selection in commercial pig breeding using imputation.Semantic proximity Read ↗

Imputation of genotypes in Danish purebred and two-way crossbred pigs using low-density panels.Semantic proximity Read ↗

Methods of tagSNP selection and other variables affecting imputation accuracy in swine.Semantic proximity Read ↗

Genomic selection using low density marker panels with application to a sire line in pigs.Semantic proximity Read ↗

Error rate for imputation from the Illumina BovineSNP50 chip to the Illumina BovineHD chip.Semantic proximity Read ↗

Multi-generational imputation of single nucleotide polymorphism marker genotypes and accuracy of genomic selection.Semantic proximity Read ↗

Within- and across-breed imputation of high-density genotypes in dairy and beef cattle from medium- and low-density genotypes.Semantic proximity Read ↗

PHARP: a pig haplotype reference panel for genotype imputation.Semantic proximity Read ↗

Empirical comparison between different methods for genomic prediction of number of piglets born alive in moderate sized breeding populations.Semantic proximity Read ↗

Design of a low-density SNP chip for the main Australian sheep breeds and its effect on imputation and genomic prediction accuracy.Semantic proximity Read ↗

Assets of imputation to ultra-high density for productive and functional traits.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.