Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Fast Ordered Sampling of DNA Sequence Variants.

G3 (Bethesda, Md.) - 4 May 2018

Greenberg Anthony J

Abstract excerpt

Explosive growth in the amount of genomic data is matched by increasing power of consumer-grade computers. Even applications that require powerful servers can be quickly tested on desktop or laptop machines if we can generate representative samples from large data sets. I describe a fast and memory-efficient implementation of an on-line sampling method developed for tape drives 30 years ago. Focusing on genotype...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Genetic Loci
Share to Genetic Variation
Share to Linkage Disequilibrium

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Time Factors

Share to Polymorphism, Single Nucleotide

Share to Base Sequence

Share to Drosophila

Source

Open in PubMed Open full text

Identifiers

PMID: 29531124
DOI: 10.1534/g3.117.300465
PMCID: PMC5940139

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Fast Ordered Sampling of DNA Sequence Variants.PMID 29531124Read ↗

A fast and simple method for detecting identity by descent segments in large-scale dataSemantic proximity Read ↗

inquiSTR: a toolkit for accurate and efficient population-scale tandem repeat genotyping and analysisSemantic proximity Read ↗

A Fast and Simple Method for Detecting Identity-by-Descent Segments in Large-Scale Data.Semantic proximity Read ↗

The GWAS Diversity Monitor tracks diversity by disease in real timeSemantic proximity Read ↗

Estimation of nucleotide diversity, disequilibrium coefficients, and mutation rates from high-coverage genome-sequencing projects.Semantic proximity Read ↗

Scalable linkage-disequilibrium-based selective sweep detection: a performance guide.Semantic proximity Read ↗

Managing High-Density Genotyping Data with Gigwa.Semantic proximity Read ↗

OmegaPlus: a scalable tool for rapid detection of selective sweeps in whole-genome datasets.Semantic proximity Read ↗

A method and program for estimating graphical models for linkage disequilibrium that scale linearly with the number of loci, and their application to gene drop simulation.Semantic proximity Read ↗

GPU accelerated population genetics statistics using pg_gpuSemantic proximity Read ↗

SweepCluster: A SNP clustering tool for detecting gene-specific sweeps in prokaryotesSemantic proximity Read ↗

LDkit: a parallel computing toolkit for linkage disequilibrium analysis.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.