Article
Epidemiological analysis of Salmonella clusters identified by whole genome sequencing, England and Wales 2014.
Food microbiology - 1 May 2018
Waldram Alison, Dolan Gayle, Ashton Philip M, Jenkins Claire, Dallman Timothy J
Abstract excerpt
The unprecedented level of bacterial strain discrimination provided by whole genome sequencing (WGS) presents new challenges with respect to the utility and interpretation of the data. Whole genome sequences from 1445 isolates of Salmonella belonging to the most commonly identified serotypes in England and Wales isolated between April and August 2014 were analysed. Single linkage single nucleotide polymorphism...
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