Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Functional 5' UTR motif discovery with LESMoN: Local Enrichment of Sequence Motifs in biological Networks.

Nucleic acids research - 13 Oct 2017

Lavallée-Adam Mathieu, Cloutier Philippe, Coulombe Benoit, Blanchette Mathieu

Abstract excerpt

Biological networks are rich representations of the relationships between entities such as genes or proteins and have become increasingly complete thanks to various high-throughput network mapping experimental approaches. Here, we propose a method to use such networks to guide the search for functional sequence motifs. Specifically, we introduce Local Enrichment of Sequence Motifs in biological Networks (LESMoN),...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to 5' Untranslated Regions
Share to Algorithms

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Binding Sites

Share to Computational Biology

Share to Gene Ontology

Share to Gene Regulatory Networks

Share to Protein Interaction Maps

Share to Regulatory Elements, Transcriptional

Source

Open in PubMed Open full text

Identifiers

PMID: 28977652
DOI: 10.1093/nar/gkx751
PMCID: PMC5737372

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Functional 5' UTR motif discovery with LESMoN: Local Enrichment of Sequence Motifs in biological Networks.PMID 28977652Read ↗

Functional network motifs defined through integration of protein-protein and genetic interactionsSemantic proximity Read ↗

FiGS-MoD: Feature-informed Gibbs Sampling Motif Discovery Algorithm for Mapping Human Signaling NetworksSemantic proximity Read ↗

Yeast protein-protein interaction binding sites: prediction from the motif-motif, motif-domain and domain-domain levels.Semantic proximity Read ↗

Conserved DNA-binding motif loci reflect functional transcription factor binding sitesSemantic proximity Read ↗

MotifMap: a human genome-wide map of candidate regulatory motif sites.Semantic proximity Read ↗

An Atlas of Short Linear Motif-Mediated Human Protein-Protein InteractionsSemantic proximity Read ↗

High-throughput methods for identification of protein-protein interactions involving short linear motifsSemantic proximity Read ↗

Use of viral motif mimicry improves the proteome-wide discovery of human linear motifsSemantic proximity Read ↗

Regulatory network motifs and hotspots of cancer genes in a mammalian cellular signalling network.Semantic proximity Read ↗

ProteoMapper: Alignment-Aware Identification and Quantitative Analysis of Contextual Motif–Domain Patterns in Protein FamiliesSemantic proximity Read ↗

motifNet: A Neural Network Approach for Learning Functional Sequence Patterns in mRNASemantic proximity Read ↗

Computational identification of human biological processes and protein sequence motifs putatively targeted by SARS-CoV-2 proteins using protein-protein interaction networksSemantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.