Article
CONE: Community Oriented Network Estimation Is a Versatile Framework for Inferring Population Structure in Large-Scale Sequencing Data.
G3 (Bethesda, Md.) - 5 Oct 2017
Kuismin Markku O, Ahlinder Jon, Sillanpӓӓ Mikko J
Abstract excerpt
Estimation of genetic population structure based on molecular markers is a common task in population genetics and ecology. We apply a generalized linear model with LASSO regularization to infer relationships between individuals and populations from molecular marker data. Specifically, we apply a neighborhood selection algorithm to infer population genetic structure and gene flow between populations. The resulting...
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