Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Approaches in Characterizing Genetic Structure and Mapping in a Rice Multiparental Population.

G3 (Bethesda, Md.) - 7 Jun 2017

Raghavan Chitra, Mauleon Ramil, Lacorte Vanica, Jubay Monalisa, Zaw Hein, Bonifacio Justine, Singh Rakesh Kumar, Huang B Emma, Leung Hei

Abstract excerpt

Multi-parent Advanced Generation Intercross (MAGIC) populations are fast becoming mainstream tools for research and breeding, along with the technology and tools for analysis. This paper demonstrates the analysis of a rice MAGIC population from data filtering to imputation and processing of genetic data to characterizing genomic structure, and finally quantitative trait loci (QTL) mapping. In this study, 1316...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Breeding
Share to Computational Biology

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Founder Effect

Share to Genome, Plant

Share to Quantitative Trait, Heritable

Share to Quantitative Trait Loci

Share to Recombination, Genetic

Source

Open in PubMed Open full text

Identifiers

PMID: 28592653
DOI: 10.1534/g3.117.042101
PMCID: PMC5473752

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Approaches in Characterizing Genetic Structure and Mapping in a Rice Multiparental Population.PMID 28592653Read ↗

SR4R: An Integrative SNP Resource for Genomic Breeding and Population Research in Rice.Semantic proximity Read ↗

A Rice Genetic Improvement Boom by Next Generation Sequencing.Semantic proximity Read ↗

Designing a Mini-Core Collection Effectively Representing 3004 Diverse Rice Accessions.Semantic proximity Read ↗

Open access resources for genome-wide association mapping in rice.Semantic proximity Read ↗

Genomic investigation of 18,421 lines reveals the genetic architecture of rice.Semantic proximity Read ↗

Haplotype-based allele mining in the Japan-MAGIC rice population.Semantic proximity Read ↗

The Power of Inbreeding: NGS-Based GWAS of Rice Reveals Convergent Evolution during Rice Domestication.Semantic proximity Read ↗

An imputation platform to enhance integration of rice genetic resources.Semantic proximity Read ↗

Genome-wide association studies of 14 agronomic traits in rice landraces.Semantic proximity Read ↗

A rice variation map derived from 10 548 rice accessions reveals the importance of rare variants.Semantic proximity Read ↗

Parent-independent genotyping for constructing an ultrahigh-density linkage map based on population sequencing.Semantic proximity Read ↗

Association Analysis of Three Diverse Rice (Oryza sativa L.) Germplasm Collections for Loci Regulating Grain Quality Traits.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.