Article
Population Genomics Related to Adaptation in Elite Oat Germplasm.
The plant genome - 1 Jul 2016
Esvelt Klos Kathy, Huang Yung-Fen, Bekele Wubishet A, Obert Don E, Babiker Ebrahiem, Beattie Aaron D, Bjørnstad Åsmund, Bonman J Michael, Carson Martin L, Chao Shiaoman, Gnanesh Belaghihalli N, Griffiths Irene, Harrison Stephen A, Howarth Catherine J, Hu Gongshe, Ibrahim Amir, Islamovic Emir, Jackson Eric W, Jannink Jean-Luc, Kolb Frederic L, McMullen Michael S, Mitchell Fetch Jennifer, Murphy J Paul, Ohm Herbert W, Rines Howard W, Rossnagel Brian G, Schlueter Jessica A, Sorrells Mark E, Wight Charlene P, Yan Weikai, Tinker Nicholas A
Abstract excerpt
Six hundred thirty five oat ( L.) lines and 4561 single-nucleotide polymorphism (SNP) loci were used to evaluate population structure, linkage disequilibrium (LD), and genotype-phenotype association with heading date. The first five principal components (PCs) accounted for 25.3% of genetic variation. Neither the eigenvalues of the first 25 PCs nor the cross-validation errors from = 1 to 20 model-based analyses...
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