Comprehensive definition of genome features in Spirodela polyrhiza by high-depth physical mapping and short-read DNA sequencing strategies.

doi:10.1111/tpj.13400

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Comprehensive definition of genome features in Spirodela polyrhiza by high-depth physical mapping and short-read DNA sequencing strategies.

The Plant journal : for cell and molecular biology - 1 Feb 2017

Michael Todd P, Bryant Douglas, Gutierrez Ryan, Borisjuk Nikolai, Chu Philomena, Zhang Hanzhong, Xia Jing, Zhou Junfei, Peng Hai, El Baidouri Moaine, Ten Hallers Boudewijn, Hastie Alex R, Liang Tiffany, Acosta Kenneth, Gilbert Sarah, McEntee Connor, Jackson Scott A, Mockler Todd C, Zhang Weixiong, Lam Eric

Abstract excerpt

Spirodela polyrhiza is a fast-growing aquatic monocot with highly reduced morphology, genome size and number of protein-coding genes. Considering these biological features of Spirodela and its basal position in the monocot lineage, understanding its genome architecture could shed light on plant adaptation and genome evolution. Like many draft genomes, however, the 158-Mb Spirodela genome sequence has not been...

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PMID: 27754575
DOI: 10.1111/tpj.13400

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