A high-density SNP genotyping array for Brassica napus and its ancestral diploid species based on optimised selection of single-locus markers in the allotetraploid genome.

doi:10.1007/s00122-016-2746-7

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A high-density SNP genotyping array for Brassica napus and its ancestral diploid species based on optimised selection of single-locus markers in the allotetraploid genome.

TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik - 1 Oct 2016

Clarke Wayne E, Higgins Erin E, Plieske Joerg, Wieseke Ralf, Sidebottom Christine, Khedikar Yogendra, Batley Jacqueline, Edwards Dave, Meng Jinling, Li Ruiyuan, Lawley Cynthia Taylor, Pauquet Jérôme, Laga Benjamin, Cheung Wing, Iniguez-Luy Federico, Dyrszka Emmanuelle, Rae Stephen, Stich Benjamin, Snowdon Rod J, Sharpe Andrew G, Ganal Martin W, Parkin Isobel A P

Abstract excerpt

KEY MESSAGE: The Brassica napus Illumina array provides genome-wide markers linked to the available genome sequence, a significant tool for genetic analyses of the allotetraploid B. napus and its progenitor diploid genomes. A high-density single nucleotide polymorphism (SNP) Illumina Infinium array, containing 52,157 markers, was developed for the allotetraploid Brassica napus. A stringent selection process...

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PMID: 27364915
DOI: 10.1007/s00122-016-2746-7
PMCID: PMC5025514

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