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Identification of <i>Salmonella</i> for public health surveillance using whole genome sequencing

5 Apr 2016

Abstract excerpt

In April 2015, Public Health England implemented whole genome sequencing (WGS) as a routine typing tool for public health surveillance of Salmonella, adopting a multilocus sequence typing (MLST) approach as a replacement for traditional serotyping. The WGS derived sequence type (ST) was compared to the phenotypic serotype for 6,887 isolates of S. enterica subspecies I, and of these, 6,616 (96%) were concordant....

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PMID: 27069781
DOI: 10.7717/peerj.1752

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