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Article

Bioinformatic Amplicon Read Processing Strategies Strongly Affect Eukaryotic Diversity and the Taxonomic Composition of Communities.

PloS one - 1 Jan 2015

Majaneva Markus, Hyytiäinen Kirsi, Varvio Sirkka Liisa, Nagai Satoshi, Blomster Jaanika

Abstract excerpt

Amplicon read sequencing has revolutionized the field of microbial diversity studies. The technique has been developed for bacterial assemblages and has undergone rigorous testing with mock communities. However, due to the great complexity of eukaryotes and the numbers of different rDNA copies, analyzing eukaryotic diversity is more demanding than analyzing bacterial or mock communities, so studies are needed...

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Identifiers

PMID: 26047335
DOI: 10.1371/journal.pone.0130035
PMCID: PMC4457843

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 6 Sept 2026. Manifest publication-graph-cohort-2026-09-06.1.

Source receipt: pubmed, retrieved 6 Sept 2026.

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