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Article

Flexible, fast and accurate sequence alignment profiling on GPGPU with PaSWAS.

PloS one - 1 Jan 2015

Warris Sven, Yalcin Feyruz, Jackson Katherine J L, Nap Jan Peter

Abstract excerpt

MOTIVATION: To obtain large-scale sequence alignments in a fast and flexible way is an important step in the analyses of next generation sequencing data. Applications based on the Smith-Waterman (SW) algorithm are often either not fast enough, limited to dedicated tasks or not sufficiently accura...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Polymorphism, Single Nucleotide

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Identifiers

PMID: 25830241
DOI: 10.1371/journal.pone.0122524
PMCID: PMC4382095

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 4 Sept 2026. Prepared record publication-25830241-2026-09-04.2. Manifest publication-graph-cohort-2026-09-04.2.

Source receipt: PubMed via Helena Literature Corpus, retrieved 4 Sept 2026.

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