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Article

Whole-genome analysis revealed the positively selected genes during the differentiation of indica and temperate japonica rice.

PloS one - 1 Jan 2015

Sun Xinli, Jia Qi, Guo Yuchun, Zheng Xiujuan, Liang Kangjing

Abstract excerpt

To investigate the selective pressures acting on the protein-coding genes during the differentiation of indica and japonica, all of the possible orthologous genes between the Nipponbare and 93-11 genomes were identified and compared with each other. Among these genes, 8,530 pairs had identical sequences, and 27,384 pairs shared more than 90% sequence identity. Only 2,678 pairs of genes displaying a Ka/Ks ratio...

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Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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Source

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Identifiers

PMID: 25774680
DOI: 10.1371/journal.pone.0119239
PMCID: PMC4361536

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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