Article
Curated genome annotation of Oryza sativa ssp. japonica and comparative genome analysis with Arabidopsis thaliana.
Genome research - 1 Feb 2007
Itoh Takeshi, Tanaka Tsuyoshi, Barrero Roberto A, Yamasaki Chisato, Fujii Yasuyuki, Hilton Phillip B, Antonio Baltazar A, Aono Hideo, Apweiler Rolf, Bruskiewich Richard, Bureau Thomas, Burr Frances, Costa de Oliveira Antonio, Fuks Galina, Habara Takuya, Haberer Georg, Han Bin, Harada Erimi, Hiraki Aiko T, Hirochika Hirohiko, Hoen Douglas, Hokari Hiroki, Hosokawa Satomi, Hsing Yue-ie, Ikawa Hiroshi, Ikeo Kazuho, Imanishi Tadashi, Ito Yukiyo, Jaiswal Pankaj, Kanno Masako, Kawahara Yoshihiro, Kawamura Toshiyuki, Kawashima Hiroaki, Khurana Jitendra P, Kikuchi Shoshi, Komatsu Setsuko, Koyanagi Kanako O, Kubooka Hiromi, Lieberherr Damien, Lin Yao-Cheng, Lonsdale David, Matsumoto Takashi, Matsuya Akihiro, McCombie W Richard, Messing Joachim, Miyao Akio, Mulder Nicola, Nagamura Yoshiaki, Nam Jongmin, Namiki Nobukazu, Numa Hisataka, Nurimoto Shin, O'Donovan Claire, Ohyanagi Hajime, Okido Toshihisa, Oota Satoshi, Osato Naoki, Palmer Lance E, Quetier Francis, Raghuvanshi Saurabh, Saichi Naomi, Sakai Hiroaki, Sakai Yasumichi, Sakata Katsumi, Sakurai Tetsuya, Sato Fumihiko, Sato Yoshiharu, Schoof Heiko, Seki Motoaki, Shibata Michie, Shimizu Yuji, Shinozaki Kazuo, Shinso Yuji, Singh Nagendra K, Smith-White Brian, Takeda Jun-ichi, Tanino Motohiko, Tatusova Tatiana, Thongjuea Supat, Todokoro Fusano, Tsugane Mika, Tyagi Akhilesh K, Vanavichit Apichart, Wang Aihui, Wing Rod A, Yamaguchi Kaori, Yamamoto Mayu, Yamamoto Naoyuki, Yu Yeisoo, Zhang Hao, Zhao Qiang, Higo Kenichi, Burr Benjamin, Gojobori Takashi, Sasaki Takuji
Abstract excerpt
We present here the annotation of the complete genome of rice Oryza sativa L. ssp. japonica cultivar Nipponbare. All functional annotations for proteins and non-protein-coding RNA (npRNA) candidates were manually curated. Functions were identified or inferred in 19,969 (70%) of the proteins, and 131 possible npRNAs (including 58 antisense transcripts) were found. Almost 5000 annotated protein-coding genes were...
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