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Deciphering variation of 239 elite japonica rice genomes for whole genome sequences-enabled breeding.

Genomics - 1 Sept 2021

Liu Chuanxue, Peng Pei, Li Weiguo, Ye Changrong, Zhang Shuhua, Wang Ruiying, Li Dong, Guan Shiwu, Zhang Lanmin, Huang Xiaoqun, Guo Zhenhua, Guo Junxiang, Long Yu, Li Le, Pan Guojun, Tian Bingchuan, Xiao Jinhua

Abstract excerpt

Revealing genomic variation of representative and diverse germplasm is the cornerstone of deploying genomics information into genetic improvement programs of species of agricultural importance. Here we report the re-sequencing of 239 japonica rice elites representing the genetic diversity of japonica germplasm in China, Japan and Korea. A total of 4.8 million SNPs and PAV of 35,634 genes were identified. The...

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PMID: 34237377
DOI: 10.1016/j.ygeno.2021.07.002

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