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Article

Shape-based retrieval of CNV regions in read coverage data.

International journal of data mining and bioinformatics - 1 Jan 2014

Hong Sangkyun, Yoon Jeehee, Hong Dongwan, Lee Unjoo, Kim Baeksop, Park Sanghyun

Abstract excerpt

This study proposes a novel copy number variation (CNV) detection method, CNV_shape, based on variations in the shape of the read coverage data which are obtained from millions of short reads aligned to a reference sequence. The proposed method carries out two transforms, mean shift transform and mean slope transform, to extract the shape of a CNV more precisely from real human data, which are vulnerable to...

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Identifiers

PMID: 25163168
DOI: 10.1504/ijdmb.2014.060051

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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