Article
An improved preprocessing algorithm for haplotype inference by pure parsimony.
Journal of bioinformatics and computational biology - 1 Aug 2014
Choi Mun-Ho, Kang Seung-Ho, Lim Hyeong-Seok
Abstract excerpt
The identification of haplotypes, which encode SNPs in a single chromosome, makes it possible to perform a haplotype-based association test with disease. Given a set of genotypes from a population, the process of recovering the haplotypes, which explain the genotypes, is called haplotype inference (HI). We propose an improved preprocessing method for solving the haplotype inference by pure parsimony (HIPP), which...
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