Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

SNP@lincTFBS: an integrated database of polymorphisms in human LincRNA transcription factor binding sites.

PloS one - 1 Jan 2014

Ning Shangwei, Zhao Zuxianglan, Ye Jingrun, Wang Peng, Zhi Hui, Li Ronghong, Wang Tingting, Wang Jianjian, Wang Lihua, Li Xia

Abstract excerpt

Large intergenic non-coding RNAs (lincRNAs) are a new class of functional transcripts, and aberrant expression of lincRNAs was associated with several human diseases. The genetic variants in lincRNA transcription factor binding sites (TFBSs) can change lincRNA expression, thereby affecting the susceptibility to human diseases. To identify and annotate these functional candidates, we have developed a database...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Binding Sites
Share to Databases, Genetic

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Genome, Human

Share to Molecular Sequence Annotation

Share to Polymorphism, Single Nucleotide

Share to RNA, Long Noncoding

Share to Transcription Factors

Share to User-Computer Interface

Source

Open in PubMed Open full text

Identifiers

PMID: 25075616
DOI: 10.1371/journal.pone.0103851
PMCID: PMC4116217

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

SNP@lincTFBS: an integrated database of polymorphisms in human LincRNA transcription factor binding sites.PMID 25075616Read ↗

LincSNP 2.0: an updated database for linking disease-associated SNPs to human long non-coding RNAs and their TFBSs.Semantic proximity Read ↗

LincSNP: a database of linking disease-associated SNPs to human large intergenic non-coding RNAs.Semantic proximity Read ↗

A global map for dissecting phenotypic variants in human lincRNAs.Semantic proximity Read ↗

LincSNP 3.0: an updated database for linking functional variants to human long non-coding RNAs, circular RNAs and their regulatory elements.Semantic proximity Read ↗

SNP@Promoter: a database of human SNPs (single nucleotide polymorphisms) within the putative promoter regions.Semantic proximity Read ↗

Genome-Wide Mapping of SNPs in Non-coding RNAs.Semantic proximity Read ↗

Effect of single nucleotide polymorphisms on the structure of long noncoding RNAs and their interaction with RNA binding proteins.Semantic proximity Read ↗

lncRNASNP: a database of SNPs in lncRNAs and their potential functions in human and mouse.Semantic proximity Read ↗

FESD: a Functional Element SNPs Database in human.Semantic proximity Read ↗

Genetic variations associated with long noncoding RNAs.Semantic proximity Read ↗

Genome-wide analysis of human SNPs at long intergenic noncoding RNAs.Semantic proximity Read ↗

Associating cancer-related RNA structure disrupting SNPs in LincRNAs to function.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.