Article
TSSV: a tool for characterization of complex allelic variants in pure and mixed genomes.
Bioinformatics (Oxford, England) - 15 Jun 2014
Anvar Seyed Yahya, van der Gaag Kristiaan J, van der Heijden Jaap W F, Veltrop Marcel H A M, Vossen Rolf H A M, de Leeuw Rick H, Breukel Cor, Buermans Henk P J, Verbeek J Sjef, de Knijff Peter, den Dunnen Johan T, Laros Jeroen F J
Abstract excerpt
MOTIVATION: Advances in sequencing technologies and computational algorithms have enabled the study of genomic variants to dissect their functional consequence. Despite this unprecedented progress, current tools fail to reliably detect and characterize more complex allelic variants, such as short tandem repeats (STRs). We developed TSSV as an efficient and sensitive tool to specifically profile all allelic...
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