Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

RARGE II: an integrated phenotype database of Arabidopsis mutant traits using a controlled vocabulary.

Plant & cell physiology - 1 Jan 2014

Akiyama Kenji, Kurotani Atsushi, Iida Kei, Kuromori Takashi, Shinozaki Kazuo, Sakurai Tetsuya

Abstract excerpt

Arabidopsis thaliana is one of the most popular experimental plants. However, only 40% of its genes have at least one experimental Gene Ontology (GO) annotation assigned. Systematic observation of mutant phenotypes is an important technique for elucidating gene functions. Indeed, several large-scale phenotypic analyses have been performed and have generated phenotypic data sets from many Arabidopsis mutant lines...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Databases, Genetic
Share to Gene Ontology

Methodology Data sources Editorial policy Privacy Delete account & data About Contact Helena Bioinformatics

Share to Genes, Plant

Share to Internet

Share to Molecular Sequence Annotation

Share to Quantitative Trait, Heritable

Share to User-Computer Interface

Share to Vocabulary, Controlled

Source

Open in PubMed Open full text

Identifiers

PMID: 24272250
DOI: 10.1093/pcp/pct165
PMCID: PMC3894705

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence. Graph snapshot: 2026-09-29.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

RARGE II: an integrated phenotype database of Arabidopsis mutant traits using a controlled vocabulary.PMID 24272250Read ↗

A trial of phenome analysis using 4000 Ds-insertional mutants in gene-coding regions of Arabidopsis.Semantic proximity Read ↗

AtPID: a genome-scale resource for genotype-phenotype associations in Arabidopsis.Semantic proximity Read ↗

The Chloroplast Function Database II: a comprehensive collection of homozygous mutants and their phenotypic/genotypic traits for nuclear-encoded chloroplast proteins.Semantic proximity Read ↗

A comprehensive dataset of genes with a loss-of-function mutant phenotype in Arabidopsis.Semantic proximity Read ↗

RARGE: a large-scale database of RIKEN Arabidopsis resources ranging from transcriptome to phenome.Semantic proximity Read ↗

AraPheno and the AraGWAS Catalog 2020: a major database update including RNA-Seq and knockout mutation data for Arabidopsis thaliana.Semantic proximity Read ↗

A sequence-based map of Arabidopsis genes with mutant phenotypes.Semantic proximity Read ↗

Phenome analysis in plant species using loss-of-function and gain-of-function mutants.Semantic proximity Read ↗

AraPheno: a public database for Arabidopsis thaliana phenotypes.Semantic proximity Read ↗

GABI-DUPLO: a collection of double mutants to overcome genetic redundancy in Arabidopsis thaliana.Semantic proximity Read ↗

Leaf phenomics: a systematic reverse genetic screen for Arabidopsis leaf mutants.Semantic proximity Read ↗

New connections across pathways and cellular processes: industrialized mutant screening reveals novel associations between diverse phenotypes in Arabidopsis.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.