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Article

RARGE II: an integrated phenotype database of Arabidopsis mutant traits using a controlled vocabulary.

Plant & cell physiology - 1 Jan 2014

Akiyama Kenji, Kurotani Atsushi, Iida Kei, Kuromori Takashi, Shinozaki Kazuo, Sakurai Tetsuya

Abstract excerpt

Arabidopsis thaliana is one of the most popular experimental plants. However, only 40% of its genes have at least one experimental Gene Ontology (GO) annotation assigned. Systematic observation of mutant phenotypes is an important technique for elucidating gene functions. Indeed, several large-scale phenotypic analyses have been performed and have generated phenotypic data sets from many Arabidopsis mutant lines...

Topics

Arabidopsis
Databases, Genetic
Gene Ontology
Genes, Plant
Internet
Molecular Sequence Annotation
Mutation
Phenotype
Quantitative Trait, Heritable
User-Computer Interface
Vocabulary, Controlled

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

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Identifiers

PMID: 24272250
DOI: 10.1093/pcp/pct165
PMCID: PMC3894705

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