Article
Genome-wide marker development for the wheat D genome based on single nucleotide polymorphisms identified from transcripts in the wild wheat progenitor Aegilops tauschii.
TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik - 1 Feb 2014
Iehisa Julio Cesar Masaru, Shimizu Akifumi, Sato Kazuhiro, Nishijima Ryo, Sakaguchi Kouhei, Matsuda Ryusuke, Nasuda Shuhei, Takumi Shigeo
Abstract excerpt
KEY MESSAGE: 13,347 high-confidence SNPs were discovered through transcriptome sequencing of Aegilops tauschii, which are useful for genomic analysis and molecular breeding of hexaploid wheat. In organisms with large and complex genomes, such as wheat, RNA-seq analysis is cost-effective for discovery of genome-wide single nucleotide polymorphisms (SNPs). In this study, deep sequencing of the spike transcriptome...
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