Article
Reference-free population genomics from next-generation transcriptome data and the vertebrate-invertebrate gap.
PLoS genetics - 1 Apr 2013
Gayral Philippe, Melo-Ferreira José, Glémin Sylvain, Bierne Nicolas, Carneiro Miguel, Nabholz Benoit, Lourenco Joao M, Alves Paulo C, Ballenghien Marion, Faivre Nicolas, Belkhir Khalid, Cahais Vincent, Loire Etienne, Bernard Aurélien, Galtier Nicolas
Abstract excerpt
In animals, the population genomic literature is dominated by two taxa, namely mammals and drosophilids, in which fully sequenced, well-annotated genomes have been available for years. Data from other metazoan phyla are scarce, probably because the vast majority of living species still lack a closely related reference genome. Here we achieve de novo, reference-free population genomic analysis from wild samples in...
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