Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

SNPranker 2.0: a gene-centric data mining tool for diseases associated SNP prioritization in GWAS.

BMC bioinformatics - 1 Jan 2013

Merelli Ivan, Calabria Andrea, Cozzi Paolo, Viti Federica, Mosca Ettore, Milanesi Luciano

Abstract excerpt

BACKGROUND: The capability of correlating specific genotypes with human diseases is a complex issue in spite of all advantages arisen from high-throughput technologies, such as Genome Wide Association Studies (GWAS). New tools for genetic variants interpretation and for Single Nucleotide Polymorphisms (SNPs) prioritization are actually needed. Given a list of the most relevant SNPs statistically associated to a...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Computational Biology
Share to Data Mining

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Disease

Share to Genome-Wide Association Study

Share to Internet

Share to Polymorphism, Single Nucleotide

Share to Software

Source

Open in PubMed Open full text

Identifiers

PMID: 23369106
DOI: 10.1186/1471-2105-14-S1-S9
PMCID: PMC3548692

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

SNPranker 2.0: a gene-centric data mining tool for diseases associated SNP prioritization in GWAS.PMID 23369106Read ↗

SNPRanker: a tool for identification and scoring of SNPs associated to target genes.Semantic proximity Read ↗

MetaRanker 2.0: a web server for prioritization of genetic variation data.Semantic proximity Read ↗

SNP prioritization using a Bayesian probability of association.Semantic proximity Read ↗

Bayesian Effect Size Ranking to Prioritise Genetic Risk Variants in Common Diseases for Follow-Up Studies.Semantic proximity Read ↗

SNPtoGO: characterizing SNPs by enriched GO terms.Semantic proximity Read ↗

MendelVar: gene prioritization at GWAS loci using phenotypic enrichment of Mendelian disease genes.Semantic proximity Read ↗

FASTSNP: an always up-to-date and extendable service for SNP function analysis and prioritization.Semantic proximity Read ↗

Prioritization of disease genes from GWAS using ensemble based positive-unlabeled learningSemantic proximity Read ↗

Variant Ranker: a web-tool to rank genomic data according to functional significance.Semantic proximity Read ↗

SPOT: a web-based tool for using biological databases to prioritize SNPs after a genome-wide association study.Semantic proximity Read ↗

SNPLogic: an interactive single nucleotide polymorphism selection, annotation, and prioritization system.Semantic proximity Read ↗

Prioritizing genes for follow-up from genome wide association studies using information on gene expression in tissues relevant for type 2 diabetes mellitus.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.