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Article

Genotyping in the cloud with Crossbow.

Current protocols in bioinformatics - 1 Sept 2012

Gurtowski James, Schatz Michael C, Langmead Ben

Abstract excerpt

Crossbow is a scalable, portable, and automatic cloud computing tool for identifying SNPs from high-coverage, short-read resequencing data. It is built on Apache Hadoop, an implementation of the MapReduce software framework. Hadoop allows Crossbow to distribute read alignment and SNP calling subtasks over a cluster of commodity computers. Two robust tools, Bowtie and SOAPsnp, implement the fundamental alignment...

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Identifiers

PMID: 22948728
DOI: 10.1002/0471250953.bi1503s39
PMCID: PMC3465669

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

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