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Article

Modeling and design by hierarchical natural moves.

Proceedings of the National Academy of Sciences of the United States of America - 21 Feb 2012

Sim Adelene Y L, Levitt Michael, Minary Peter

Abstract excerpt

We develop a unique algorithm implemented in the program MOSAICS (Methodologies for Optimization and Sampling in Computational Studies) that is capable of nanoscale modeling without compromising the resolution of interest. This is achieved by modeling with customizable hierarchical degrees of freedom, thereby circumventing major limitations of conventional molecular modeling. With the emergence of RNA-based...

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PMID: 22308445
DOI: 10.1073/pnas.1119918109
PMCID: PMC3287004

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