Article
Genomic breeding value estimation using genetic markers, inferred ancestral haplotypes, and the genomic relationship matrix.
Journal of dairy science - 1 Sept 2011
de Roos A P W, Schrooten C, Druet T
Abstract excerpt
With the introduction of new single nucleotide polymorphism (SNP) chips of various densities, more and more genotype data sets will include animals genotyped for only a subset of the SNP. Imputation techniques based on unobserved ancestral haplotypes may be used to infer missing genotypes. These ancestral haplotypes may also be used in the genomic prediction model, instead of using the SNP. This may increase the...
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