Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Single nucleotide polymorphism (SNP)-based differentiation of Shigella isolates by pyrosequencing.

Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases - 1 Oct 2011

Hayford Alice E, Mammel Mark K, Lacher David W, Brown Eric W

Abstract excerpt

Analysis of single nucleotide polymorphisms (SNPs) is an important genetic tool that provides molecular markers for rapid differentiation of closely related strains. We have applied SNP discovery and analysis for distinguishing each of the four Shigella serogroups (Boydii, Dysenteriae, Flexneri, and Sonnei) and for discriminating individual strains within the same serogroup by using 24 SNPs selected from nine...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Bacterial Typing Techniques
Share to DNA, Bacterial

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Dysentery, Bacillary

Share to Food Microbiology

Share to Genome, Bacterial

Share to Sequence Analysis, DNA

Share to Serotyping

Share to Shigella

Source

Identifiers

PMID: 21839856
DOI: 10.1016/j.meegid.2011.07.015

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 6 Sept 2026. Manifest publication-graph-cohort-2026-09-06.1.

Source receipt: pubmed, retrieved 6 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Single nucleotide polymorphism (SNP)-based differentiation of Shigella isolates by pyrosequencing.PMID 21839856Read ↗

Rapid SNP Detection and Genotyping of Bacterial Pathogens by Pyrosequencing.Semantic proximity Read ↗

Defining the phylogenomics of Shigella species: a pathway to diagnostics.Semantic proximity Read ↗

Development of a new molecular subtyping tool for Salmonella enterica serovar Enteritidis based on single nucleotide polymorphism genotyping using PCR.Semantic proximity Read ↗

Interrogation of single nucleotide polymorphisms in gnd provides a novel method for molecular serogrouping of clinically important Shiga toxin producing Escherichia coli (STEC) targeted by regulation in the United States, including the "big six" non-O157 STEC and STEC O157.Semantic proximity Read ↗

Identification and characterization of simple sequence repeats in the genomes of Shigella species.Semantic proximity Read ↗

Association of nucleotide polymorphisms within the O-antigen gene cluster of Escherichia coli O26, O45, O103, O111, O121, and O145 with serogroups and genetic subtypes.Semantic proximity Read ↗

ShigaPass: an in silico tool predicting Shigella serotypes from whole-genome sequencing assembliesSemantic proximity Read ↗

In Silico Serotyping Based on Whole-Genome Sequencing Improves the Accuracy of Shigella IdentificationSemantic proximity Read ↗

Identification and interrogation of highly informative single nucleotide polymorphism sets defined by bacterial multilocus sequence typing databases.Semantic proximity Read ↗

Canonical Single Nucleotide Polymorphisms (SNPs) for High-Resolution Subtyping of Shiga-Toxin Producing Escherichia coli (STEC) O157:H7.Semantic proximity Read ↗

Robust Performance of Culture, qPCR, and Genomic Approaches for Shigella Serotyping in a Pediatric Surveillance CohortSemantic proximity Read ↗

Multilocus sequence typing analysis of Shigella flexneri isolates collected in Asian countries.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.