Genomospecies identification and phylogenomic relevance of AFLP analysis of isolated and non-isolated strains of Frankia spp.

doi:10.1016/j.syapm.2010.10.004

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Article

Genomospecies identification and phylogenomic relevance of AFLP analysis of isolated and non-isolated strains of Frankia spp.

Systematic and applied microbiology - 1 May 2011

Bautista G H H, Cruz H A, Nesme X, Valdés M, Mendoza H A, Fernandez M P

Abstract excerpt

Amplified fragment length polymorphism (AFLP) was tested as an alternative to the DNA-DNA hybridization technique (DDH) to delineate genomospecies and the phylogenetic structure within the genus Frankia. Forty Frankia strains, including representatives of seven DDH genomospecies, were typed in order to infer current genome mispairing (CGM) and evolutionary genomic distance (EGD). The constructed phylogeny...

Topics

Amplified Fragment Length Polymorphism Analysis
DNA, Bacterial
Frankia
Genetic Variation
Genome, Bacterial
Magnoliopsida
Phylogeny
Polymerase Chain Reaction
Root Nodules, Plant
Species Specificity
Symbiosis

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PMID: 21310572
DOI: 10.1016/j.syapm.2010.10.004

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