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Article

Assignment of chromosomal locations for unassigned SNPs/scaffolds based on pair-wise linkage disequilibrium estimates.

BMC bioinformatics - 7 Apr 2010

Khatkar Mehar S, Hobbs Matthew, Neuditschko Markus, Sölkner Johann, Nicholas Frank W, Raadsma Herman W

Abstract excerpt

BACKGROUND: Recent developments of high-density SNP chips across a number of species require accurate genetic maps. Despite rapid advances in genome sequence assembly and availability of a number of tools for creating genetic maps, the exact genome location for a number of SNPs from these SNP chips still remains unknown. We have developed a locus ordering procedure based on linkage disequilibrium (LODE) which...

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PMID: 20370931
DOI: 10.1186/1471-2105-11-171
PMCID: PMC2859757

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

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