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Optimizing de novo transcriptome assembly and extending genomic resources for striped catfish (Pangasianodon hypophthalmus).

Marine genomics - 1 Oct 2015

Thanh Nguyen Minh, Jung Hyungtaek, Lyons Russell E, Njaci Isaac, Yoon Byoung-Ha, Chand Vincent, Tuan Nguyen Viet, Thu Vo Thi Minh, Mather Peter

Abstract excerpt

Striped catfish (Pangasianodon hypophthalmus) is a commercially important freshwater fish used in inland aquaculture in the Mekong Delta, Vietnam. The culture industry is facing a significant challenge however from saltwater intrusion into many low topographical coastal provinces across the Mekong Delta as a result of predicted climate change impacts. Developing genomic resources for this species can facilitate...

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PMID: 25979246
DOI: 10.1016/j.margen.2015.05.001

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