Article
Single-feature polymorphism discovery by computing probe affinity shape powers.
BMC genetics - 26 Aug 2009
Xu Wayne Wenzhong, Cho Seungho, Yang S Samuel, Bolon Yung-Tsi, Bilgic Hatice, Jia Haiyan, Xiong Yanwen, Muehlbauer Gary J
Abstract excerpt
BACKGROUND: Single-feature polymorphism (SFP) discovery is a rapid and cost-effective approach to identify DNA polymorphisms. However, high false positive rates and/or low sensitivity are prevalent in previously described SFP detection methods. This work presents a new computing method for SFP discovery. RESULTS: The probe affinity differences and affinity shape powers formed by the neighboring probes in each...
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