MapView: visualization of short reads alignment on a desktop computer.

Abstract excerpt

UNLABELLED: We introduce a new visual analytics tool named MapView to facilitate the representation of large-scale short reads alignment data and genetic variation analysis. MapView can handle hundreds of millions of short reads on a desktop computer with limited memory. It supports a compact alignment view for both single-end and paired end short reads, multiple navigation and zoom modes and multi-thread...

Topics

Share this publication in a Topic to start or enrich a Post.

• Share to Computational Biology
• Share to Computer Graphics
• Share to Gene Expression Profiling