Article
Descendants of whole genome duplication within gene order phylogeny.
Journal of computational biology : a journal of computational molecular cell biology - 1 Oct 2008
Zheng Chunfang, Zhu Qian, Sankoff David
Abstract excerpt
Genome doubling simultaneously doubles all genetic markers. Genome rearrangement phylogenetics requires that all genomes analyzed have the same set of orthologs, so that it is not possible to include doubled and unduplicated genomes in the same phylogeny. A framework for solving this difficulty requires separating out various possible local configurations of doubled and unduplicated genomes in a given phylogeny,...
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