Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

PolyScan: an automatic indel and SNP detection approach to the analysis of human resequencing data.

Genome research - 1 May 2007

Chen Ken, McLellan Michael D, Ding Li, Wendl Michael C, Kasai Yumi, Wilson Richard K, Mardis Elaine R

Abstract excerpt

Small insertions and deletions (indels) and single nucleotide polymorphisms (SNPs) are common genetic variants that are thought to be associated with a wide variety of human diseases. Owing to the genome's size and complexity, manually characterizing each one of these variations in an individual is not practical. While significant progress has been made in automated single-base mutation discovery from the...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Algorithms
Share to Base Sequence
Share to Molecular Sequence Data

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to Polymorphism, Single Nucleotide

Share to Sequence Alignment

Share to Sequence Analysis, DNA

Share to Sequence Deletion

Share to Software

Source

Open in PubMed Open full text

Identifiers

PMID: 17416743
DOI: 10.1101/gr.6151507
PMCID: PMC1855178

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-07.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

PolyScan: an automatic indel and SNP detection approach to the analysis of human resequencing data.PMID 17416743Read ↗

Automating resequencing-based detection of insertion-deletion polymorphisms.Semantic proximity Read ↗

A universal algorithm for de novo decrypting of heterozygous indel sequences: a tool for personalized medicine.Semantic proximity Read ↗

Machine learning-based detection of insertions and deletions in the human genomeSemantic proximity Read ↗

Characterizing and interpreting genetic variation from personal genome sequencing.Semantic proximity Read ↗

PPLine: An Automated Pipeline for SNP, SAP, and Splice Variant Detection in the Context of Proteogenomics.Semantic proximity Read ↗

InSNP: a tool for automated detection and visualization of SNPs and InDels.Semantic proximity Read ↗

novoSNP3: variant detection and sequence annotation in resequencing projects.Semantic proximity Read ↗

Analysis of insertion-deletion from deep-sequencing data: software evaluation for optimal detection.Semantic proximity Read ↗

A probabilistic approach for SNP discovery in high-throughput human resequencing data.Semantic proximity Read ↗

VarDetect: a nucleotide sequence variation exploratory tool.Semantic proximity Read ↗

Identification of indels in next-generation sequencing data.Semantic proximity Read ↗

A graph clustering algorithm for detection and genotyping of structural variants from long reads.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.