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Article

SNPmasker: automatic masking of SNPs and repeats across eukaryotic genomes.

Nucleic acids research - 1 Jul 2006

Andreson Reidar, Puurand Tarmo, Remm Maido

Abstract excerpt

SNPmasker is a comprehensive web interface for masking large eukaryotic genomes. The program is designed to mask SNPs from recent dbSNP database and to mask the repeats with two alternative programs. In addition to the SNP masking, we also offer population-specific substitution of SNP alleles in genomic sequence according to SNP frequencies in HapMap Phase II data. The input to SNPmasker can be defined in...

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PMID: 16845091
DOI: 10.1093/nar/gkl125
PMCID: PMC1538889

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