Discover Community Create You

Loading publication...

Noodle always counts identifier-free feature events for service operation. With your permission, Google Analytics can also estimate audience and engagement. Search text, publication identifiers, cookies, IP addresses and browser fingerprints are never included in Noodle's first-party event counters.

Privacy details

Article

Analysis of complex HIV-1 intersubtype recombinants using a Bayesian scanning method.

Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases - 1 Apr 2005

Paraskevis D, Deforche K, Abecasis A, Camacho R, Vandamme A-M

Abstract excerpt

The increased complexity of HIV-1 genetic heterogeneity raises the issue for reliable classification and analysis of these sequences. Until now, bootscanning analysis has been the main method used for the analysis of potential HIV-1 intersubtype recombinants. We show evidence that in some cases of complex recombinants, where three or more segments with discordant phylogenetic signal may exist in protease (PR) and...

Read the complete abstract on PubMed

Topics

Share this publication in a Topic to start or enrich a Post.

Share to Africa, Central
Share to Bayes Theorem

Methodology Data sources Editorial policy Privacy About Contact Helena Bioinformatics

Share to HIV Protease

Share to HIV Reverse Transcriptase

Share to Recombination, Genetic

Share to Sequence Analysis

Share to Software

Source

Identifiers

PMID: 15737912
DOI: 10.1016/j.meegid.2004.07.006

Provenance

PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

Source receipt: pubmed, retrieved 7 Sept 2026.

Related research

Semantic proximity does not establish scientific evidence.

Research trail→

Click a neighbor to travelStep 1 · 12 closest

Analysis of complex HIV-1 intersubtype recombinants using a Bayesian scanning method.PMID 15737912Read ↗

Identification of breakpoints in intergenotypic recombinants of HIV type 1 by bootscanning.Semantic proximity Read ↗

Genetic analysis of the near full-length genome of an HIV type 1 A1/C unique recombinant form from northern South Africa.Semantic proximity Read ↗

Pol bootscanning analysis of HIV type 1 can exhibit unexpected recombinations.Semantic proximity Read ↗

Re-analysis of 34 full-length HIV-1 intersubtype recombinant sequences.Semantic proximity Read ↗

The identification of a complex A/G/I/J recombinant HIV type 1 virus in various West African countries.Semantic proximity Read ↗

Evidence of a novel B/C recombinant exhibiting unique breakpoints of near full-length HIV type 1 genome from Northeastern India.Semantic proximity Read ↗

Most HIV type 1 non-B infections in the Spanish cohort of antiretroviral treatment-naïve HIV-infected patients (CoRIS) are due to recombinant viruses.Semantic proximity Read ↗

Genetic diversity of HIV-1 non-B strains in Sicily: evidence of intersubtype recombinants by sequence analysis of gag, pol, and env genes.Semantic proximity Read ↗

A standardized framework for accurate, high-throughput genotyping of recombinant and non-recombinant viral sequences.Semantic proximity Read ↗

High HIV-1 genetic diversity in Cuba.Semantic proximity Read ↗

Complex mosaic composition of near full-length genomes of two NED (NIH-ENVA-DOD) subtype panel HIV type 1 strains, BCF-Dioum and BCF-Kita, originating from the Democratic Republic of Congo (DRC).Semantic proximity Read ↗

Genetic and functional characterization of human immunodeficiency virus type 1 VprC variants from north India: presence of unique recombinants with mosaic genomes from B, C and D subtypes within the open reading frame of Vpr.Semantic proximity Read ↗

⌁Select a neighboring publication to make it the new centre.