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Aligning multiple protein sequences by parallel hybrid genetic algorithm.

Genome informatics. International Conference on Genome Informatics - 1 Jan 2002

Nguyen Hung Dinh, Yoshihara Ikuo, Yamamori Kunihito, Yasunaga Moritoshi

Abstract excerpt

This paper presents a parallel hybrid genetic algorithm (GA) for solving the sum-of-pairs multiple protein sequence alignment. A new chromosome representation and its corresponding genetic operators are proposed. A multi-population GENITOR-type GA is combined with local search heuristics. It is then extended to run in parallel on a multiprocessor system for speeding up. Experimental results of benchmarks from the...

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PMID: 14571381

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PubMed metadata and Literature Corpus relationships. Corpus snapshot updated 7 Sept 2026. Manifest publication-graph-cohort-2026-09-08.1.

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