Article

Fast, lightweight, and accurate metagenomic functional profiling using FracMinHash sketches

2023-11-06

Abstract excerpt

Motivation: Functional profiling of metagenomic samples is essential to decipher the functional capabilities of microbial communities. Traditional and more widely used functional profilers in the context of metagenomics rely on aligning reads against a known reference database. However, aligning sequencing reads against a large and fast-growing database is computationally expensive. In general, k -mer-based sketc...

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Literature Corpus work: fcd8ce4a-9dbc-5d13-8a20-7667a2df4d42
DOI: 10.1101/2023.11.06.565843

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