Article

RNAquarium: an archive-scale atlas of zebrafish gene expression coupled with pan-taxonomic profiling reveals diverse viral drivers of transcriptomic states

2026-06-19

Abstract excerpt

<h4>SUMMARY</h4> Zebrafish RNA-seq studies span diverse developmental, physiological, and disease contexts, yet most analyses remain confined to individual experiments and disregard the non-zebrafish component of the data. We present RNAquarium, a scalable framework for joint transcriptomic and metatranscriptomic analysis of RNA-seq data and apply it to all publicly available zebrafish RNA-seq datasets in the Seq...

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Literature Corpus work: f15148b6-52d5-5b3e-a999-50ddec2bbe0a
DOI: 10.64898/2026.06.17.732950

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