Article

mtx-COBRA: Subcellular localization prediction for bacterial proteins

2023-10-04

Abstract excerpt

<h4>Background</h4> Bacteria can have beneficial effects on our health and environment; however, many are responsible for serious infectious diseases, warranting the need for vaccines against such pathogens. Bioinformatic and experimental technologies are crucial for the development of vaccines. The vaccine design pipeline requires identification of bacteria-specific antigens that can be recognized and induce a r...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: e9445616-2be4-58fb-80af-172cfb7cc791
DOI: 10.1101/2023.10.04.560913

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

mtx-COBRA: Subcellular localization prediction for bacterial proteinsDOI 10.1101/2023.10.04.560913Read

Determination of secretion type associated motifs from pathogenic protein sequencesSemantic proximity Read

Lineage-specific microbial protein prediction enables large-scale exploration of protein ecology within the human gutSemantic proximity Read

Predicting Immunogenic CD4+ T Cell Epitopes in Bacteria Using Antigen and Peptide FeaturesSemantic proximity Read

ReVac: a reverse vaccinology computational pipeline for prioritization of prokaryotic protein vaccine candidatesSemantic proximity Read

Mature Epitope Density--a strategy for target selection based on immunoinformatics and exported prokaryotic proteins.Semantic proximity Read

In Silico Prediction of a Multitope Vaccine against Moraxella catarrhalis: Reverse Vaccinology and ImmunoinformaticsSemantic proximity Read

Predicting <i>Mycobacterium abscessus</i> proteins with atypical amino acid composition essential for human infectionsSemantic proximity Read

Whole-genome prediction of bacterial pathogenic capacity on novel bacteria using protein language models, with PathogenFinder2Semantic proximity Read

Proteome Exploration of <i>Legionella pneumophila</i> for Identifying Novel Therapeutics: A Hierarchical Subtractive Genomics and Reverse Vaccinology ApproachSemantic proximity Read

Bacterial protein function prediction via multimodal deep learningSemantic proximity Read

PBITV3 : A robust and comprehensive tool for screening pathogenic proteomes for drug targets and prioritizing vaccine candidatesSemantic proximity Read

Putative novel B-cell vaccine candidates identified by reverse vaccinology and genomics approaches to control Acinetobacter baumannii serotypesSemantic proximity Read