Article

TolRad: A model for predicting radiation tolerance using Pfam annotations identifies novel radiosensitive bacterial species from reference genomes and MAGs

2023-11-02

Abstract excerpt

The trait of ionizing radiation (IR) tolerance is variable between bacterial species, with radiosensitive bacteria succumbing to acute doses around 100Gy and extremophiles able to survive doses exceeding 10,000Gy. While survival screens have identified multiple highly radioresistant bacteria, such systemic searches have not been conducted for radiosensitive bacteria. The taxonomy-level diversity of IR of intoleran...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: e0356d8f-bd64-520c-a612-d82330022ebb
DOI: 10.1101/2023.11.02.562514

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

TolRad: A model for predicting radiation tolerance using Pfam annotations identifies novel radiosensitive bacterial species from reference genomes and MAGsDOI 10.1101/2023.11.02.562514Read

A computational protocol to characterize elusive Candidate Phyla Radiation bacteria in oral environments using metagenomic dataSemantic proximity Read

Tardigrades dramatically upregulate DNA repair pathway genes in response to ionizing radiationSemantic proximity Read

Adaptation to space conditions of novel bacterial species isolated from the International Space Station revealed by functional gene annotations and comparative genome analysisSemantic proximity Read

Machine learning algorithm to characterize antimicrobial resistance associated with the International Space Station surface microbiomeSemantic proximity Read

Radiation-resistant and desiccation-tolerant bacteria from the Chavara-Neendakara high background radiation area, india: phenotypic characterisation and genomic insights.Semantic proximity Read

Prediction of Ionizing Radiation Resistance in Bacteria Using a Multiple Instance Learning Model.Semantic proximity Read

Machine learning algorithm to characterize antimicrobial resistance associated with the International Space Station surface microbiomeSemantic proximity Read

Specific Members of the Gut Microbiota are Reliable Biomarkers of Irradiation Intensity and Lethality in Large Animal Models of Human HealthSemantic proximity Read

Adaptation to space conditions of novel bacterial species isolated from the International Space Station revealed by functional gene annotations and comparative genome analysisSemantic proximity Read

Entropy of a bacterial stress response is a generalizable predictor for fitness and antibiotic sensitivitySemantic proximity Read

A family of RRM-1 RNA binding proteins enables cold adaptation and environmental resilience in <i>Bacteroides</i>Semantic proximity Read

Microbial cells can cooperate to resist high-level chronic ionizing radiationSemantic proximity Read