Article

Genomics and epidemiology of a novel SARS-CoV-2 lineage in Manaus, Brazil

2021-03-03

Abstract excerpt

Cases of SARS-CoV-2 infection in Manaus, Brazil, resurged in late 2020, despite high levels of previous infection there. Through genome sequencing of viruses sampled in Manaus between November 2020 and January 2021, we identified the emergence and circulation of a novel SARS-CoV-2 variant of concern, lineage P.1, that acquired 17 mutations, including a trio in the spike protein (K417T, E484K and N501Y) associated...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: cabd0284-2059-5fae-bc5f-6503615e8025
DOI: 10.1101/2021.02.26.21252554

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

Genomics and epidemiology of a novel SARS-CoV-2 lineage in Manaus, BrazilDOI 10.1101/2021.02.26.21252554Read

Genomics and epidemiology of the P.1 SARS-CoV-2 lineage in Manaus, Brazil.Semantic proximity Read

Model-based estimation of transmissibility and reinfection of SARS-CoV-2 P.1 variantSemantic proximity Read

Identification of SARS-CoV-2 P.1-related lineages in Brazil provides new insights about the mechanisms of emergence of Variants of ConcernSemantic proximity Read

The Epidemiological Scenario of the SARS-CoV-2 Omicron Emergence in the Southeast Brazilian PopulationSemantic proximity Read

Mutation hotspots, geographical and temporal distribution of SARS-CoV-2 lineages in Brazil, February 2020-2021: insights and limitations from uneven sequencing effortsSemantic proximity Read

Mutation hotspots and spatiotemporal distribution of SARS-CoV-2 lineages in Brazil, February 2020-2021.Semantic proximity Read

Detection of SARS-CoV-2 lineage P.1 in patients from a region with exponentially increasing hospitalisation rate, February 2021, Rio Grande do Sul, Southern BrazilSemantic proximity Read

The past, current and future epidemiological dynamic of SARS-CoV-2Semantic proximity Read

The new SARS-CoV-2 variant and reinfection in the resurgence of COVID-19 outbreaks in Manaus, BrazilSemantic proximity Read

Comparative genomics and characterization of SARS-CoV-2 P.1 (Gamma) Variant of Concern (VOC) from Amazonas, BrazilSemantic proximity Read

SARS-CoV-2 introduction and lineage dynamics across three epidemic peaks in Southern Brazil: massive spread of P.1Semantic proximity Read

SARS-CoV-2 introduction and lineage dynamics across three epidemic peaks in Southern Brazil: massive spread of P.1.Semantic proximity Read