Back to search

Article

Tomato brown rugose fruit virus Mo gene is a novel microbial source tracking marker

2023-01-10

Abstract excerpt

Microbial source tracking (MST) identifies sources of fecal contamination in the environment using fecal host-associated markers. While there are numerous bacterial MST markers, there are few viral markers. Here we design and test novel viral MST markers based on tomato brown rugose fruit virus (ToBRFV) genomes. We assembled eight nearly complete genomes of ToBRFV from wastewater and stool samples from the San Fra...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work
c8488aff-6801-50bc-820b-66b84cf3e907
DOI
10.1101/2023.01.09.523366
Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest
Interactive article relationship graphSelect a related publication card to move it into the centre and load its closest explainable connections. Solid lines are source-backed structured connections. Dashed lines are semantic discovery signals and are not scientific evidence.
Tomato brown rugose fruit virus Mo gene is a novel microbial source tracking markerDOI 10.1101/2023.01.09.523366
The Tomato Brown Rugose Fruit Virus Movement Protein Gene Is a Novel Microbial Source Tracking MarkerSemantic proximity
Genetic Evaluation of Pepper Mild Mottle Virus as an Indicator in Water Quality Monitoring and Human Fecal Contamination in Swedish Waters.Semantic proximity
Host Specificity and Sensitivity of Established and Novel Sewage-Associated Marker Genes in Human and Nonhuman Fecal SamplesSemantic proximity
Sequencing and variant detection of eight abundant plant-infecting tobamoviruses across Southern California wastewaterSemantic proximity
A Novel Tiled-Amplicon Sequencing Assay Targeting the <i>Tomato Brown Rugose Fruit Virus</i> ( <i>ToBRFV</i> ) Genome Reveals Widespread Distribution in Municipal Wastewater Treatment Systems in the Province of Ontario, CanadaSemantic proximity
Wastewater Surveillance for Monkeypox Virus in Nine California CommunitiesSemantic proximity
Superior performance of human wastewater-associated viral markers compared to bacterial markers in tropical environmentsSemantic proximity
Longitudinal and Quantitative Fecal Shedding Dynamics of SARS-CoV-2, Pepper Mild Mottle Virus and CrAssphageSemantic proximity
Persistence of respiratory, enteric, and fecal indicator viruses in fecal sludge from on-site sanitation in Dakar, SenegalSemantic proximity
A High-Throughput Microfluidic Quantitative PCR Platform for the Simultaneous Quantification of Pathogens, Fecal Indicator Bacteria, and Microbial Source Tracking MarkersSemantic proximity
Metagenome-based comparisons of decay rates and host-specificity of fecal microbial communities for improved microbial source trackingSemantic proximity
High-Throughput Microfluidic Quantitative PCR Platform for the Simultaneous Quantification of Pathogens, Fecal Indicator Bacteria, and Microbial Source Tracking MarkersSemantic proximity
Select a neighboring publication to make it the new centre.