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A comparison of two open-source methods for molecular phylogenetic analysis of Human Immunodeficiency Virus (HIV): Hypothesis testing using Phylogenetics (HyPhy) and Molecular Evolutionary Genetics Analysis (MEGA)

2025-09-30

Abstract excerpt

We compared two widely used methods for Human Immunodeficiency Virus (HIV) molecular phylogenetic analysis (MPA) - Hypothesis testing using Phylogenetics (HyPhy) and Molecular Evolutionary Genetics Analysis (MEGA) – to consider which could strengthen surveillance and better target prevention interventions in Queensland, Australia. HIV pol sequences generated for drug resistance testing were linked to de-identified...

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Literature Corpus work
c5ca7759-89fa-5032-b480-95ce8ad634c1
DOI
10.1101/2025.09.28.25336847
Open publication

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A comparison of two open-source methods for molecular phylogenetic analysis of Human Immunodeficiency Virus (HIV): Hypothesis testing using Phylogenetics (HyPhy) and Molecular Evolutionary Genetics Analysis (MEGA)DOI 10.1101/2025.09.28.25336847
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