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Insights into HIV-1 Transmission Dynamics Using Routinely Collected Data in the Mid-Atlantic United States.

Viruses - 25 Dec 2022

Kassaye Seble G, Grossman Zehava, Vengurlekar Priyanka, Chai William, Wallace Megan, Rhee Soo-Yon, Meyer William A, Kaufman Harvey W, Castel Amanda, Jordan Jeanne, Crandall Keith A, Kang Alisa, Kumar Princy, Katzenstein David A, Shafer Robert W, Maldarelli Frank

Abstract excerpt

Background: Molecular epidemiological approaches provide opportunities to characterize HIV transmission dynamics. We analyzed HIV sequences and virus load (VL) results obtained during routine clinical care, and individual’s zip-code location to determine utility of this approach. Methods: HIV-1 pol sequences aligned using ClustalW were subtyped using REGA. A maximum likelihood (ML) tree was generated using...

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PMID: 36680108
DOI: 10.3390/v15010068
PMCID: PMC9863702

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