Article

Chromosome-scale genome assembly provides insights into rye biology, evolution, and agronomic potential

2019-12-12

Abstract excerpt

We present a chromosome-scale annotated assembly of the rye ( Secale cereale L. inbred line ‘Lo7’) genome, which we use to explore Triticeae genomic evolution, and rye’s superior disease and stress tolerance. The rye genome shares chromosome-level organization with other Triticeae cereals, but exhibits unique retrotransposon dynamics and structural features. Crop improvement in rye, as well as in wheat and tritic...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: c19a077b-7559-58ef-81a4-2d3f42ba0aec
DOI: 10.1101/2019.12.11.869693

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

Chromosome-scale genome assembly provides insights into rye biology, evolution, and agronomic potentialDOI 10.1101/2019.12.11.869693Read

Towards a whole-genome sequence for rye (Secale cereale L.).Semantic proximity Read

Reticulate evolution of the rye genome.Semantic proximity Read

Population genomic analysis reveals domestication of cultivated rye from weedy rye.Semantic proximity Read

Scale development and utilization of universal PCR-based and high-throughput KASP markers specific for chromosome arms of rye (Secale cereale L.).Semantic proximity Read

Major chromosome rearrangements in intergeneric wheat × rye hybrids in compatible and incompatible crosses detected by GBS read coverage analysis.Semantic proximity Read

From RNA-seq to large-scale genotyping - genomics resources for rye (Secale cereale L.).Semantic proximity Read

Construction of a high-density genetic map and mapping of a spike length locus for rye.Semantic proximity Read

QTL mapping and comparative genome analysis of agronomic traits including grain yield in winter rye.Semantic proximity Read

A chromosome-based draft sequence of the hexaploid bread wheat (Triticum aestivum) genome.Semantic proximity Read

Genotyping-by-sequencing and genome-wide association study reveal genetic diversity and loci controlling agronomic traits in triticale.Semantic proximity Read

Structural variation-based and gene-based pangenome construction reveals untapped diversity of hexaploid wheat.Semantic proximity Read

Genomes of 13 domesticated and wild rice relatives highlight genetic conservation, turnover and innovation across the genus Oryza.Semantic proximity Read