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Structural variation-based and gene-based pangenome construction reveals untapped diversity of hexaploid wheat.

Journal of genetics and genomics = Yi chuan xue bao - 1 Jun 2025

Cheng Hong, Kong Lingpeng, Zhu Kun, Zhao Hang, Li Xiuli, Zhang Yanwen, Ning Weidong, Jiang Mei, Song Bo, Cheng Shifeng

Abstract excerpt

Increasing number of structural variations (SVs) have been identified as causative mutations for diverse agronomic traits. However, the systematic exploration of SVs quantity, distribution, and contribution in wheat was lacking. Here, we report high-quality gene-based and SV-based pangenomes comprising 22 hexaploid wheat assemblies showing a wide range of chromosome size, gene number, and TE component, which...

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PMID: 40189201
DOI: 10.1016/j.jgg.2025.03.015

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