Back to search

Article

CellDART: Cell type inference by domain adaptation of single-cell and spatial transcriptomic data

2021-04-27

Abstract excerpt

Deciphering the cellular composition in genome-wide spatially resolved transcriptomic data is a critical task to clarify the spatial context of cells in a tissue. In this study, we developed a method, CellDART, which estimates the spatial distribution of cells defined by single-cell level data using domain adaptation of neural networks and applied it to the spatial mapping of human lung tissue. The neural network...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work
c0febc6c-3b1d-53f8-906f-e49d5fb721d9
DOI
10.1101/2021.04.26.441459
Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest
Interactive article relationship graphSelect a related publication card to move it into the centre and load its closest explainable connections. Solid lines are source-backed structured connections. Dashed lines are semantic discovery signals and are not scientific evidence.
CellDART: Cell type inference by domain adaptation of single-cell and spatial transcriptomic dataDOI 10.1101/2021.04.26.441459
Select a neighboring publication to make it the new centre.