Article

Yeast Knowledge Graphs Database for Exploring <i>Saccharomyces cerevisiae</i> and <i>Schizosaccharomyces pombe</i>

2024-12-09

Abstract excerpt

<h4>ABSTRACT</h4> Biomedical literature contains an extensive wealth of information on gene and protein function across various biological processes and diseases. However, navigating this vast and often restricted-access data can be challenging, making it difficult to extract specific insights efficiently. In this study, we introduce a high-throughput pipeline that leverages OpenAI’s Generative Pre-Trained Transf...

Topics

Open a Topic to create a Post that cites this publication.

Identifiers and source

Literature Corpus work: b5e3ad4a-67fc-53d8-9632-02503e039034
DOI: 10.1101/2024.12.04.626523

Open publication

Related research

Semantic proximity does not establish scientific evidence.

Click a neighbor to travelStep 1 · 12 closest

Yeast Knowledge Graphs Database for Exploring <i>Saccharomyces cerevisiae</i> and <i>Schizosaccharomyces pombe</i>DOI 10.1101/2024.12.04.626523Read

YeastNet v3: a public database of data-specific and integrated functional gene networks for Saccharomyces cerevisiae.Semantic proximity Read

Alzheimer’s Disease Knowledge Graph Enhances Knowledge Discovery and Disease PredictionSemantic proximity Read

Transcriptome Graph Transformer--A Graph Transformer-Based Unsupervised Model for Transcriptome Data AnalysisSemantic proximity Read

The Use of Graph Databases in Systems Biology: A Systematic ReviewSemantic proximity Read

A Framework for Automated Construction of Heterogeneous Large-Scale Biomedical Knowledge GraphsSemantic proximity Read

Integrating and formatting biomedical data as pre-calculated knowledge graph embeddings in the BiotequeSemantic proximity Read

Enriched knowledge representation in biological fields: A case study of Literature-based Discovery in Alzheimer's DiseaseSemantic proximity Read

Injecting domain knowledge into graph neural networks for protein-protein interactionsSemantic proximity Read

Accelerating COVID-19 research with graph mining and transformer-based learningSemantic proximity Read

Knowledge Graph and Machine Learning Help the Research of Drugs Aimed at Neurological DiseasesSemantic proximity Read

Extracting Knowledge Networks from Plant Scientific Literature: Potato Tuber Flesh Color as an Exemplary TraitSemantic proximity Read

Large-scale extraction of gene regulation for model organisms in an ontological context.Semantic proximity Read